Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBB4AP04350 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
TUBB4AP04350 AC006058.3-201ENST00000606217 1069 ntBASIC18.63■□□□□ 0.57
TUBB4AP04350 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBB4AP04350 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TUBB4AP04350 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TUBB4AP04350 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBB4AP04350 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.62■□□□□ 0.57
TUBB4AP04350 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TUBB4AP04350 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.62■□□□□ 0.57
TUBB4AP04350 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.62■□□□□ 0.57
TUBB4AP04350 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.62■□□□□ 0.57
TUBB4AP04350 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TUBB4AP04350 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBB4AP04350 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBB4AP04350 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 HLA-A-202ENST00000376806 1854 ntBASIC18.61■□□□□ 0.57
TUBB4AP04350 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBB4AP04350 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TUBB4AP04350 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBB4AP04350 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.61■□□□□ 0.57
TUBB4AP04350 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBB4AP04350 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TUBB4AP04350 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBB4AP04350 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TUBB4AP04350 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBB4AP04350 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB4AP04350 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBB4AP04350 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TUBB4AP04350 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBB4AP04350 AC092384.3-202ENST00000564646 2873 ntBASIC18.6■□□□□ 0.57
TUBB4AP04350 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms