Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 AC018695.7-201ENST00000624587 2492 ntBASIC16.25■□□□□ 0.19
PDGFAP04085 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.25■□□□□ 0.19
PDGFAP04085 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFAP04085 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.25■□□□□ 0.19
PDGFAP04085 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFAP04085 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFAP04085 AC005829.1-201ENST00000570002 483 ntBASIC16.25■□□□□ 0.19
PDGFAP04085 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFAP04085 MIR4469-201ENST00000583919 79 ntBASIC16.25■□□□□ 0.19
PDGFAP04085 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 PGM5P2-202ENST00000637225 1043 ntBASIC16.25■□□□□ 0.19
PDGFAP04085 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFAP04085 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFAP04085 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFAP04085 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.24■□□□□ 0.19
PDGFAP04085 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 AC096633.1-201ENST00000422446 749 ntBASIC16.24■□□□□ 0.19
PDGFAP04085 HTR5BP-201ENST00000430851 1154 ntBASIC16.24■□□□□ 0.19
PDGFAP04085 PRYP5-201ENST00000451909 266 ntBASIC16.24■□□□□ 0.19
PDGFAP04085 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.24■□□□□ 0.19
PDGFAP04085 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PDGFAP04085 YBX1P5-201ENST00000509441 847 ntBASIC16.24■□□□□ 0.19
PDGFAP04085 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.24■□□□□ 0.19
PDGFAP04085 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDGFAP04085 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PDGFAP04085 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.24■□□□□ 0.19
PDGFAP04085 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 SIGLEC16-201ENST00000599858 1437 ntBASIC16.24■□□□□ 0.19
PDGFAP04085 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PDGFAP04085 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFAP04085 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFAP04085 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFAP04085 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PDGFAP04085 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFAP04085 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms