Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHRNA1P02708 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA1P02708 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA1P02708 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA1P02708 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 AC002056.1-201ENST00000395613 760 ntBASIC18.76■□□□□ 0.59
CHRNA1P02708 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNA1P02708 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNA1P02708 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA1P02708 AC140658.5-201ENST00000438532 169 ntBASIC18.76■□□□□ 0.59
CHRNA1P02708 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNA1P02708 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA1P02708 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNA1P02708 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA1P02708 AC093520.2-201ENST00000561830 333 ntBASIC18.76■□□□□ 0.59
CHRNA1P02708 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA1P02708 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA1P02708 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA1P02708 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA1P02708 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA1P02708 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA1P02708 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRNA1P02708 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA1P02708 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA1P02708 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA1P02708 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA1P02708 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA1P02708 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CHRNA1P02708 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRNA1P02708 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHRNA1P02708 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 AL354751.1-201ENST00000412768 1863 ntBASIC18.74■□□□□ 0.59
CHRNA1P02708 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 AL355306.1-201ENST00000415580 579 ntBASIC18.74■□□□□ 0.59
CHRNA1P02708 AL671277.1-201ENST00000429656 993 ntBASIC18.74■□□□□ 0.59
CHRNA1P02708 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 AC023141.5-201ENST00000458585 616 ntBASIC18.74■□□□□ 0.59
CHRNA1P02708 KRT8P48-201ENST00000515599 1220 ntBASIC18.74■□□□□ 0.59
CHRNA1P02708 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.74■□□□□ 0.59
CHRNA1P02708 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.74■□□□□ 0.59
CHRNA1P02708 AL645728.2-201ENST00000641974 660 ntBASIC18.74■□□□□ 0.59
CHRNA1P02708 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHRNA1P02708 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA1P02708 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA1P02708 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA1P02708 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA1P02708 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA1P02708 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA1P02708 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA1P02708 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CHRNA1P02708 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 TIMM8BP1-201ENST00000452384 211 ntBASIC18.73■□□□□ 0.59
CHRNA1P02708 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA1P02708 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA1P02708 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.73■□□□□ 0.59
CHRNA1P02708 AC026120.1-201ENST00000611536 926 ntBASIC18.73■□□□□ 0.59
CHRNA1P02708 AC093512.1-201ENST00000617969 520 ntBASIC18.73■□□□□ 0.59
CHRNA1P02708 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 AL355312.1-201ENST00000407115 2176 ntBASIC18.73■□□□□ 0.59
CHRNA1P02708 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA1P02708 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms