Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTA1P02549 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTA1P02549 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTA1P02549 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SPTA1P02549 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.67■□□□□ 0.1
SPTA1P02549 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPTA1P02549 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTA1P02549 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTA1P02549 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPTA1P02549 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTA1P02549 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.66■□□□□ 0.1
SPTA1P02549 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTA1P02549 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPTA1P02549 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SPTA1P02549 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SPTA1P02549 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTA1P02549 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.66■□□□□ 0.1
SPTA1P02549 AC129492.6-201ENST00000611383 1305 ntBASIC15.66■□□□□ 0.1
SPTA1P02549 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SPTA1P02549 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SPTA1P02549 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 AL671277.1-201ENST00000429656 993 ntBASIC15.66■□□□□ 0.1
SPTA1P02549 RN7SL589P-201ENST00000481268 310 ntBASIC15.66■□□□□ 0.1
SPTA1P02549 AC243562.1-201ENST00000560672 389 ntBASIC15.66■□□□□ 0.1
SPTA1P02549 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTA1P02549 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTA1P02549 IGHV3-72-202ENST00000621503 303 ntBASIC15.66■□□□□ 0.1
SPTA1P02549 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SPTA1P02549 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTA1P02549 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 UXT-AS1-201ENST00000590504 1525 ntBASIC15.65■□□□□ 0.1
SPTA1P02549 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.65■□□□□ 0.1
SPTA1P02549 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SPTA1P02549 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 AC009118.2-201ENST00000613275 655 ntBASIC15.65■□□□□ 0.1
SPTA1P02549 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPTA1P02549 PTCHD3P3-201ENST00000403073 906 ntBASIC15.65■□□□□ 0.1
SPTA1P02549 AC092580.3-201ENST00000430932 139 ntBASIC15.65■□□□□ 0.1
SPTA1P02549 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.65■□□□□ 0.1
SPTA1P02549 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.65■□□□□ 0.1
SPTA1P02549 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.65■□□□□ 0.1
SPTA1P02549 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.65■□□□□ 0.1
SPTA1P02549 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTA1P02549 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTA1P02549 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SPTA1P02549 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.64■□□□□ 0.09
SPTA1P02549 U91328.1-201ENST00000437528 223 ntBASIC15.64■□□□□ 0.09
SPTA1P02549 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.64■□□□□ 0.09
SPTA1P02549 AC004890.2-204ENST00000481968 304 ntBASIC15.64■□□□□ 0.09
SPTA1P02549 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.64■□□□□ 0.09
SPTA1P02549 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.64■□□□□ 0.09
SPTA1P02549 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.64■□□□□ 0.09
SPTA1P02549 AC005332.7-201ENST00000614046 2005 ntBASIC15.64■□□□□ 0.09
SPTA1P02549 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SPTA1P02549 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SPTA1P02549 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SPTA1P02549 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTA1P02549 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms