Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL2A1P02458 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL2A1P02458 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.06■□□□□ 0.8
COL2A1P02458 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL2A1P02458 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 KRT18P32-201ENST00000424695 1287 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.05■□□□□ 0.8
COL2A1P02458 GPS2P2-201ENST00000430745 888 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.05■□□□□ 0.8
COL2A1P02458 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.05■□□□□ 0.8
COL2A1P02458 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC239800.4-201ENST00000603712 296 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.05■□□□□ 0.8
COL2A1P02458 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.05■□□□□ 0.8
COL2A1P02458 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL2A1P02458 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL2A1P02458 MIR770-201ENST00000390219 98 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC025678.2-201ENST00000562061 970 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.05■□□□□ 0.8
COL2A1P02458 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.05■□□□□ 0.8
COL2A1P02458 AL031055.1-201ENST00000606362 631 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 AP001059.3-201ENST00000619053 235 ntBASIC20.05■□□□□ 0.8
COL2A1P02458 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.05■□□□□ 0.8
COL2A1P02458 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.05■□□□□ 0.8
COL2A1P02458 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL2A1P02458 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL2A1P02458 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.04■□□□□ 0.8
COL2A1P02458 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 AL512356.2-201ENST00000546955 174 ntBASIC20.04■□□□□ 0.8
COL2A1P02458 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 NOC2LP1-202ENST00000452600 2235 ntBASIC20.04■□□□□ 0.8
COL2A1P02458 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 AC093525.9-201ENST00000624961 1746 ntBASIC20.04■□□□□ 0.8
COL2A1P02458 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL2A1P02458 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.04■□□□□ 0.8
COL2A1P02458 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL2A1P02458 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.03■□□□□ 0.8
COL2A1P02458 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.03■□□□□ 0.8
COL2A1P02458 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.03■□□□□ 0.8
COL2A1P02458 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.03■□□□□ 0.8
COL2A1P02458 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.03■□□□□ 0.8
COL2A1P02458 FAM8A3P-201ENST00000427218 844 ntBASIC20.03■□□□□ 0.8
COL2A1P02458 SPCS2P4-201ENST00000436160 681 ntBASIC20.03■□□□□ 0.8
COL2A1P02458 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 AC067863.1-201ENST00000494933 530 ntBASIC20.03■□□□□ 0.8
COL2A1P02458 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COL2A1P02458 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL2A1P02458 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.03■□□□□ 0.8
COL2A1P02458 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.03■□□□□ 0.8
COL2A1P02458 AC011467.4-201ENST00000594891 528 ntBASIC20.03■□□□□ 0.8
COL2A1P02458 AC093512.1-201ENST00000617969 520 ntBASIC20.03■□□□□ 0.8
COL2A1P02458 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.03■□□□□ 0.8
COL2A1P02458 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.03■□□□□ 0.8
COL2A1P02458 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL2A1P02458 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms