Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL1A1P02452 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.71■□□□□ 0.91
COL1A1P02452 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A1P02452 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 NOC2LP2-201ENST00000407594 1944 ntBASIC20.7■□□□□ 0.9
COL1A1P02452 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.7■□□□□ 0.9
COL1A1P02452 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.7■□□□□ 0.9
COL1A1P02452 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 BCRP1-201ENST00000444246 691 ntBASIC20.7■□□□□ 0.9
COL1A1P02452 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.7■□□□□ 0.9
COL1A1P02452 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.7■□□□□ 0.9
COL1A1P02452 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.7■□□□□ 0.9
COL1A1P02452 AL096865.1-201ENST00000606796 927 ntBASIC20.7■□□□□ 0.9
COL1A1P02452 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL1A1P02452 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
COL1A1P02452 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.7■□□□□ 0.9
COL1A1P02452 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A1P02452 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
COL1A1P02452 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A1P02452 AC067852.2-201ENST00000590513 2313 ntBASIC20.7■□□□□ 0.9
COL1A1P02452 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.69■□□□□ 0.9
COL1A1P02452 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 AC023141.5-201ENST00000458585 616 ntBASIC20.69■□□□□ 0.9
COL1A1P02452 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.69■□□□□ 0.9
COL1A1P02452 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL1A1P02452 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
COL1A1P02452 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 AC116353.5-201ENST00000638148 1699 ntBASIC20.69■□□□□ 0.9
COL1A1P02452 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.69■□□□□ 0.9
COL1A1P02452 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.69■□□□□ 0.9
COL1A1P02452 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
COL1A1P02452 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL1A1P02452 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.69■□□□□ 0.9
COL1A1P02452 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL1A1P02452 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL1A1P02452 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL1A1P02452 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
COL1A1P02452 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.69■□□□□ 0.9
COL1A1P02452 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.69■□□□□ 0.9
COL1A1P02452 AL138688.1-201ENST00000624851 1594 ntBASIC20.68■□□□□ 0.9
COL1A1P02452 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A1P02452 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A1P02452 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.68■□□□□ 0.9
COL1A1P02452 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COL1A1P02452 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
COL1A1P02452 AC068880.1-201ENST00000507289 2297 ntBASIC20.68■□□□□ 0.9
COL1A1P02452 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.68■□□□□ 0.9
COL1A1P02452 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A1P02452 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A1P02452 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.68■□□□□ 0.9
COL1A1P02452 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL1A1P02452 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
COL1A1P02452 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.68■□□□□ 0.9
COL1A1P02452 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.68■□□□□ 0.9
COL1A1P02452 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms