Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
APBA3O96018 AL096828.2-201ENST00000567259 1965 ntBASIC21.94■■□□□ 1.1
APBA3O96018 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.94■■□□□ 1.1
APBA3O96018 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
APBA3O96018 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APBA3O96018 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
APBA3O96018 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.94■■□□□ 1.1
APBA3O96018 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
APBA3O96018 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
APBA3O96018 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
APBA3O96018 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.93■■□□□ 1.1
APBA3O96018 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.93■■□□□ 1.1
APBA3O96018 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.93■■□□□ 1.1
APBA3O96018 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.93■■□□□ 1.1
APBA3O96018 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.93■■□□□ 1.1
APBA3O96018 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.93■■□□□ 1.1
APBA3O96018 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.93■■□□□ 1.1
APBA3O96018 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
APBA3O96018 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.93■■□□□ 1.1
APBA3O96018 AL844908.2-201ENST00000609461 460 ntBASIC21.93■■□□□ 1.1
APBA3O96018 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.93■■□□□ 1.1
APBA3O96018 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.93■■□□□ 1.1
APBA3O96018 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APBA3O96018 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.93■■□□□ 1.1
APBA3O96018 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
APBA3O96018 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.92■■□□□ 1.1
APBA3O96018 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 HAUS4P1-201ENST00000406739 1145 ntBASIC21.92■■□□□ 1.1
APBA3O96018 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.92■■□□□ 1.1
APBA3O96018 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.92■■□□□ 1.1
APBA3O96018 AC119751.2-201ENST00000504529 210 ntBASIC21.92■■□□□ 1.1
APBA3O96018 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.92■■□□□ 1.1
APBA3O96018 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.92■■□□□ 1.1
APBA3O96018 WASH4P-201ENST00000564273 1246 ntBASIC21.92■■□□□ 1.1
APBA3O96018 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
APBA3O96018 TEX28P1-201ENST00000613479 1221 ntBASIC21.92■■□□□ 1.1
APBA3O96018 TEX28P2-201ENST00000617764 1221 ntBASIC21.92■■□□□ 1.1
APBA3O96018 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.92■■□□□ 1.1
APBA3O96018 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APBA3O96018 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.92■■□□□ 1.1
APBA3O96018 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.91■■□□□ 1.1
APBA3O96018 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
APBA3O96018 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
APBA3O96018 AL391825.1-201ENST00000457671 1364 ntBASIC21.91■■□□□ 1.1
APBA3O96018 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
APBA3O96018 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.91■■□□□ 1.1
APBA3O96018 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APBA3O96018 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.91■■□□□ 1.1
APBA3O96018 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.91■■□□□ 1.1
APBA3O96018 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.91■■□□□ 1.1
APBA3O96018 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.91■■□□□ 1.1
APBA3O96018 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.91■■□□□ 1.1
APBA3O96018 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.91■■□□□ 1.1
APBA3O96018 AC099568.2-201ENST00000609194 695 ntBASIC21.91■■□□□ 1.1
APBA3O96018 GPR182-203ENST00000622922 591 ntBASIC21.91■■□□□ 1.1
APBA3O96018 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.91■■□□□ 1.1
APBA3O96018 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.91■■□□□ 1.1
APBA3O96018 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
APBA3O96018 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
APBA3O96018 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.9■■□□□ 1.1
APBA3O96018 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.9■■□□□ 1.1
APBA3O96018 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
APBA3O96018 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.9■■□□□ 1.1
APBA3O96018 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.9■■□□□ 1.1
APBA3O96018 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.9■■□□□ 1.1
APBA3O96018 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APBA3O96018 AC135586.1-201ENST00000539323 574 ntBASIC21.9■■□□□ 1.1
APBA3O96018 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.9■■□□□ 1.1
APBA3O96018 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.9■■□□□ 1.1
APBA3O96018 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms