Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.18■□□□□ 0.5
TRUB2O95900 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRUB2O95900 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRUB2O95900 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRUB2O95900 SLC25A1P3-201ENST00000395415 828 ntBASIC18.18■□□□□ 0.5
TRUB2O95900 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.18■□□□□ 0.5
TRUB2O95900 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 SIGLEC30P-201ENST00000455569 941 ntBASIC18.18■□□□□ 0.5
TRUB2O95900 AL160237.2-201ENST00000556165 472 ntBASIC18.18■□□□□ 0.5
TRUB2O95900 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.18■□□□□ 0.5
TRUB2O95900 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRUB2O95900 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRUB2O95900 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.18■□□□□ 0.5
TRUB2O95900 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB2O95900 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.18■□□□□ 0.5
TRUB2O95900 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 FAM197Y8-203ENST00000450145 560 ntBASIC18.17■□□□□ 0.5
TRUB2O95900 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.17■□□□□ 0.5
TRUB2O95900 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.17■□□□□ 0.5
TRUB2O95900 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.17■□□□□ 0.5
TRUB2O95900 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB2O95900 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.16■□□□□ 0.5
TRUB2O95900 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRUB2O95900 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.16■□□□□ 0.5
TRUB2O95900 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 PRYP5-201ENST00000451909 266 ntBASIC18.16■□□□□ 0.5
TRUB2O95900 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 AP002469.2-201ENST00000531724 424 ntBASIC18.16■□□□□ 0.5
TRUB2O95900 AC021087.4-201ENST00000563761 564 ntBASIC18.16■□□□□ 0.5
TRUB2O95900 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 AL022326.1-202ENST00000641533 845 ntBASIC18.16■□□□□ 0.5
TRUB2O95900 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.16■□□□□ 0.5
TRUB2O95900 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.16■□□□□ 0.5
TRUB2O95900 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms