Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CACNA1FO60840 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.62■■□□□ 1.05
CACNA1FO60840 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.62■■□□□ 1.05
CACNA1FO60840 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.62■■□□□ 1.05
CACNA1FO60840 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.62■■□□□ 1.05
CACNA1FO60840 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.62■■□□□ 1.05
CACNA1FO60840 AC023141.13-201ENST00000604991 943 ntBASIC21.62■■□□□ 1.05
CACNA1FO60840 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.62■■□□□ 1.05
CACNA1FO60840 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.62■■□□□ 1.05
CACNA1FO60840 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CACNA1FO60840 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 KRT8P49-201ENST00000604166 1432 ntBASIC21.61■■□□□ 1.05
CACNA1FO60840 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.61■■□□□ 1.05
CACNA1FO60840 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.61■■□□□ 1.05
CACNA1FO60840 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CACNA1FO60840 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CACNA1FO60840 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CACNA1FO60840 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.61■■□□□ 1.05
CACNA1FO60840 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.61■■□□□ 1.05
CACNA1FO60840 MKNK2P1-201ENST00000437526 628 ntBASIC21.61■■□□□ 1.05
CACNA1FO60840 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.61■■□□□ 1.05
CACNA1FO60840 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.61■■□□□ 1.05
CACNA1FO60840 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.61■■□□□ 1.05
CACNA1FO60840 AL513190.1-201ENST00000621254 727 ntBASIC21.61■■□□□ 1.05
CACNA1FO60840 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.61■■□□□ 1.05
CACNA1FO60840 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CACNA1FO60840 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CACNA1FO60840 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.61■■□□□ 1.05
CACNA1FO60840 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.6■■□□□ 1.05
CACNA1FO60840 AC060834.1-201ENST00000443027 2032 ntBASIC21.6■■□□□ 1.05
CACNA1FO60840 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CACNA1FO60840 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.6■■□□□ 1.05
CACNA1FO60840 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.6■■□□□ 1.05
CACNA1FO60840 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.6■■□□□ 1.05
CACNA1FO60840 AC091167.2-201ENST00000579581 588 ntBASIC21.6■■□□□ 1.05
CACNA1FO60840 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CACNA1FO60840 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CACNA1FO60840 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
CACNA1FO60840 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CACNA1FO60840 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CACNA1FO60840 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CACNA1FO60840 RPSAP43-201ENST00000402237 625 ntBASIC21.59■■□□□ 1.05
CACNA1FO60840 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.59■■□□□ 1.05
CACNA1FO60840 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CACNA1FO60840 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.59■■□□□ 1.05
CACNA1FO60840 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.59■■□□□ 1.05
CACNA1FO60840 AC099522.2-201ENST00000607001 744 ntBASIC21.59■■□□□ 1.05
CACNA1FO60840 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CACNA1FO60840 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
CACNA1FO60840 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CACNA1FO60840 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CACNA1FO60840 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.59■■□□□ 1.05
CACNA1FO60840 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.59■■□□□ 1.05
CACNA1FO60840 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.59■■□□□ 1.05
CACNA1FO60840 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.59■■□□□ 1.05
CACNA1FO60840 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.59■■□□□ 1.05
CACNA1FO60840 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.59■■□□□ 1.05
CACNA1FO60840 AL009183.1-201ENST00000603760 355 ntBASIC21.59■■□□□ 1.05
CACNA1FO60840 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.59■■□□□ 1.05
CACNA1FO60840 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms