Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.6■□□□□ 0.25
LCMT2O60294 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LCMT2O60294 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 FAAHP1-202ENST00000446499 1238 ntBASIC16.6■□□□□ 0.25
LCMT2O60294 FAM197Y8-203ENST00000450145 560 ntBASIC16.6■□□□□ 0.25
LCMT2O60294 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.6■□□□□ 0.25
LCMT2O60294 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.6■□□□□ 0.25
LCMT2O60294 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LCMT2O60294 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 AC012313.1-201ENST00000593393 3059 ntBASIC16.59■□□□□ 0.25
LCMT2O60294 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.59■□□□□ 0.25
LCMT2O60294 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.59■□□□□ 0.25
LCMT2O60294 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 TPM4P1-201ENST00000436100 807 ntBASIC16.59■□□□□ 0.25
LCMT2O60294 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.59■□□□□ 0.25
LCMT2O60294 RNPS1P1-201ENST00000507437 918 ntBASIC16.59■□□□□ 0.25
LCMT2O60294 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.59■□□□□ 0.25
LCMT2O60294 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.59■□□□□ 0.25
LCMT2O60294 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.59■□□□□ 0.25
LCMT2O60294 AC025062.2-201ENST00000605477 670 ntBASIC16.59■□□□□ 0.25
LCMT2O60294 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LCMT2O60294 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCMT2O60294 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LCMT2O60294 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCMT2O60294 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LCMT2O60294 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.58■□□□□ 0.25
LCMT2O60294 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCMT2O60294 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LCMT2O60294 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCMT2O60294 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCMT2O60294 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LCMT2O60294 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.58■□□□□ 0.24
LCMT2O60294 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 LINC00982-205ENST00000420957 435 ntBASIC16.58■□□□□ 0.24
LCMT2O60294 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.58■□□□□ 0.24
LCMT2O60294 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.58■□□□□ 0.24
LCMT2O60294 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 AL160237.2-201ENST00000556165 472 ntBASIC16.58■□□□□ 0.24
LCMT2O60294 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms