Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSSCA1O60232 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SSSCA1O60232 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSSCA1O60232 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSSCA1O60232 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 BX276092.7-203ENST00000637198 1536 ntBASIC14.2□□□□□ -0.14
SSSCA1O60232 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SSSCA1O60232 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 AC092053.1-201ENST00000605787 1936 ntBASIC14.2□□□□□ -0.14
SSSCA1O60232 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.2□□□□□ -0.14
SSSCA1O60232 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.2□□□□□ -0.14
SSSCA1O60232 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 AC078925.2-201ENST00000624013 1973 ntBASIC14.2□□□□□ -0.14
SSSCA1O60232 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSSCA1O60232 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSSCA1O60232 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 AL662844.4-201ENST00000606367 2838 ntBASIC14.19□□□□□ -0.14
SSSCA1O60232 AL596257.1-201ENST00000641463 2694 ntBASIC14.19□□□□□ -0.14
SSSCA1O60232 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.19□□□□□ -0.14
SSSCA1O60232 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSSCA1O60232 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
SSSCA1O60232 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.19□□□□□ -0.14
SSSCA1O60232 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
SSSCA1O60232 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.19□□□□□ -0.14
SSSCA1O60232 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.19□□□□□ -0.14
SSSCA1O60232 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.19□□□□□ -0.14
SSSCA1O60232 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.19□□□□□ -0.14
SSSCA1O60232 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.19□□□□□ -0.14
SSSCA1O60232 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.19□□□□□ -0.14
SSSCA1O60232 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 AC132872.4-202ENST00000622924 2756 ntBASIC14.19□□□□□ -0.14
SSSCA1O60232 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.19□□□□□ -0.14
SSSCA1O60232 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSSCA1O60232 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SSSCA1O60232 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SSSCA1O60232 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms