Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
IDH3BO43837 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.02■□□□□ 0.15
IDH3BO43837 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IDH3BO43837 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IDH3BO43837 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.02■□□□□ 0.15
IDH3BO43837 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IDH3BO43837 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.02■□□□□ 0.15
IDH3BO43837 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IDH3BO43837 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
IDH3BO43837 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.02■□□□□ 0.15
IDH3BO43837 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.01■□□□□ 0.15
IDH3BO43837 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 AC140113.3-201ENST00000605663 199 ntBASIC16.01■□□□□ 0.15
IDH3BO43837 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
IDH3BO43837 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IDH3BO43837 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.01■□□□□ 0.15
IDH3BO43837 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 AC009949.1-201ENST00000623048 1830 ntBASIC16.01■□□□□ 0.15
IDH3BO43837 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.01■□□□□ 0.15
IDH3BO43837 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
IDH3BO43837 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16■□□□□ 0.15
IDH3BO43837 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16■□□□□ 0.15
IDH3BO43837 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16■□□□□ 0.15
IDH3BO43837 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16■□□□□ 0.15
IDH3BO43837 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16■□□□□ 0.15
IDH3BO43837 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16■□□□□ 0.15
IDH3BO43837 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16■□□□□ 0.15
IDH3BO43837 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
IDH3BO43837 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
IDH3BO43837 AC009154.2-201ENST00000621177 724 ntBASIC16■□□□□ 0.15
IDH3BO43837 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
IDH3BO43837 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
IDH3BO43837 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 LINC02199-201ENST00000506655 2702 ntBASIC16■□□□□ 0.15
IDH3BO43837 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IDH3BO43837 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16■□□□□ 0.15
IDH3BO43837 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IDH3BO43837 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 RASA4DP-201ENST00000460726 1199 ntBASIC15.99■□□□□ 0.15
IDH3BO43837 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.99■□□□□ 0.15
IDH3BO43837 AC145285.6-201ENST00000604632 637 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms