Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SNAI2O43623 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.05□□□□□ -0.32
SNAI2O43623 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.05□□□□□ -0.32
SNAI2O43623 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 REXO1L11P-201ENST00000620964 1927 ntBASIC13.05□□□□□ -0.32
SNAI2O43623 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SNAI2O43623 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNAI2O43623 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.05□□□□□ -0.32
SNAI2O43623 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SNAI2O43623 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
SNAI2O43623 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
SNAI2O43623 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.04□□□□□ -0.32
SNAI2O43623 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.04□□□□□ -0.32
SNAI2O43623 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.04□□□□□ -0.32
SNAI2O43623 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.04□□□□□ -0.32
SNAI2O43623 FAM197Y4-202ENST00000622692 608 ntBASIC13.04□□□□□ -0.32
SNAI2O43623 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SNAI2O43623 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SNAI2O43623 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.04□□□□□ -0.32
SNAI2O43623 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNAI2O43623 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SNAI2O43623 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.04□□□□□ -0.32
SNAI2O43623 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SNAI2O43623 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.04□□□□□ -0.32
SNAI2O43623 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.03□□□□□ -0.32
SNAI2O43623 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.03□□□□□ -0.32
SNAI2O43623 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 AC106886.4-201ENST00000623557 2502 ntBASIC13.03□□□□□ -0.32
SNAI2O43623 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.03□□□□□ -0.32
SNAI2O43623 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
SNAI2O43623 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SNAI2O43623 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNAI2O43623 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.03□□□□□ -0.32
SNAI2O43623 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.03□□□□□ -0.32
SNAI2O43623 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.03□□□□□ -0.32
SNAI2O43623 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.03□□□□□ -0.32
SNAI2O43623 AL359736.2-201ENST00000621992 437 ntBASIC13.03□□□□□ -0.32
SNAI2O43623 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SNAI2O43623 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms