Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.65■□□□□ 0.42
RIPK2O43353 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.65■□□□□ 0.42
RIPK2O43353 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.65■□□□□ 0.42
RIPK2O43353 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.65■□□□□ 0.42
RIPK2O43353 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
RIPK2O43353 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
RIPK2O43353 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.65■□□□□ 0.42
RIPK2O43353 RASA4DP-201ENST00000460726 1199 ntBASIC17.65■□□□□ 0.42
RIPK2O43353 AC068472.1-201ENST00000474589 881 ntBASIC17.65■□□□□ 0.42
RIPK2O43353 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.65■□□□□ 0.42
RIPK2O43353 NAPSB-206ENST00000562112 1266 ntBASIC17.65■□□□□ 0.42
RIPK2O43353 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RIPK2O43353 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.65■□□□□ 0.42
RIPK2O43353 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 AC011270.2-201ENST00000624293 2550 ntBASIC17.65■□□□□ 0.42
RIPK2O43353 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
RIPK2O43353 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPK2O43353 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RIPK2O43353 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
RIPK2O43353 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RIPK2O43353 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.64■□□□□ 0.41
RIPK2O43353 AC007950.2-201ENST00000615045 2347 ntBASIC17.64■□□□□ 0.41
RIPK2O43353 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RIPK2O43353 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPK2O43353 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 MYCLP1-201ENST00000372451 1075 ntBASIC17.64■□□□□ 0.41
RIPK2O43353 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPK2O43353 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPK2O43353 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPK2O43353 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPK2O43353 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPK2O43353 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RIPK2O43353 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.64■□□□□ 0.41
RIPK2O43353 OR6D1P-203ENST00000641209 4860 ntBASIC17.64■□□□□ 0.41
RIPK2O43353 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RIPK2O43353 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPK2O43353 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.64■□□□□ 0.41
RIPK2O43353 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.64■□□□□ 0.41
RIPK2O43353 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RIPK2O43353 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.63■□□□□ 0.41
RIPK2O43353 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.63■□□□□ 0.41
RIPK2O43353 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.63■□□□□ 0.41
RIPK2O43353 EGFEM1P-202ENST00000431685 1563 ntBASIC17.63■□□□□ 0.41
RIPK2O43353 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.63■□□□□ 0.41
RIPK2O43353 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.63■□□□□ 0.41
RIPK2O43353 AC019129.2-201ENST00000609837 1235 ntBASIC17.63■□□□□ 0.41
RIPK2O43353 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
RIPK2O43353 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RIPK2O43353 AC097374.2-201ENST00000618617 1306 ntBASIC17.63■□□□□ 0.41
RIPK2O43353 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RIPK2O43353 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms