Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 AC084018.2-201ENST00000613093 2607 ntBASIC16.61■□□□□ 0.25
PCDH17O14917 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 COX5BP2-201ENST00000392354 334 ntBASIC16.61■□□□□ 0.25
PCDH17O14917 KRT18P67-201ENST00000432816 1264 ntBASIC16.61■□□□□ 0.25
PCDH17O14917 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
PCDH17O14917 AC073648.2-201ENST00000510116 352 ntBASIC16.61■□□□□ 0.25
PCDH17O14917 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDH17O14917 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 AL773604.1-201ENST00000617417 272 ntBASIC16.61■□□□□ 0.25
PCDH17O14917 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH17O14917 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 AC100803.2-201ENST00000562459 1963 ntBASIC16.6■□□□□ 0.25
PCDH17O14917 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH17O14917 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDH17O14917 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH17O14917 DDX43P3-201ENST00000441064 443 ntBASIC16.6■□□□□ 0.25
PCDH17O14917 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 AC093909.1-201ENST00000504731 1122 ntBASIC16.6■□□□□ 0.25
PCDH17O14917 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH17O14917 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDH17O14917 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH17O14917 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDH17O14917 MTDHP3-201ENST00000594186 672 ntBASIC16.6■□□□□ 0.25
PCDH17O14917 AC023511.2-201ENST00000618803 211 ntBASIC16.6■□□□□ 0.25
PCDH17O14917 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH17O14917 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDH17O14917 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 TNRC18P3-201ENST00000441896 2691 ntBASIC16.6■□□□□ 0.25
PCDH17O14917 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH17O14917 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH17O14917 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 MRPL3P1-201ENST00000400109 1033 ntBASIC16.59■□□□□ 0.25
PCDH17O14917 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms