Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN4O14493 MTDHP4-201ENST00000600287 670 ntBASIC16.37■□□□□ 0.21
CLDN4O14493 AL031008.1-201ENST00000619963 541 ntBASIC16.37■□□□□ 0.21
CLDN4O14493 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CLDN4O14493 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CLDN4O14493 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN4O14493 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN4O14493 AC079781.3-201ENST00000449110 356 ntBASIC16.36■□□□□ 0.21
CLDN4O14493 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN4O14493 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 RNPS1P1-201ENST00000507437 918 ntBASIC16.36■□□□□ 0.21
CLDN4O14493 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN4O14493 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN4O14493 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.36■□□□□ 0.21
CLDN4O14493 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN4O14493 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN4O14493 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN4O14493 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN4O14493 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN4O14493 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLDN4O14493 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLDN4O14493 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CLDN4O14493 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 AC148477.5-201ENST00000625164 1645 ntBASIC16.35■□□□□ 0.21
CLDN4O14493 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLDN4O14493 KRT18P67-201ENST00000432816 1264 ntBASIC16.35■□□□□ 0.21
CLDN4O14493 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN4O14493 AL662844.1-201ENST00000546340 181 ntBASIC16.35■□□□□ 0.21
CLDN4O14493 AC021087.4-201ENST00000563761 564 ntBASIC16.35■□□□□ 0.21
CLDN4O14493 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN4O14493 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN4O14493 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CLDN4O14493 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLDN4O14493 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN4O14493 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN4O14493 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms