Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 AC006116.8-202ENST00000587620 1550 ntBASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 AC145285.3-201ENST00000564603 959 ntBASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA2E9PIF3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA2E9PIF3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.83■□□□□ 0.13
NPIPA2E9PIF3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA2E9PIF3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA2E9PIF3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA2E9PIF3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA2E9PIF3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 Z83851.2-201ENST00000609564 659 ntBASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 AC027601.4-201ENST00000611259 610 ntBASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NPIPA2E9PIF3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 SPDYE21P-201ENST00000413323 827 ntBASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 MED15P5-201ENST00000423150 992 ntBASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 AC034105.1-201ENST00000563488 319 ntBASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 AC140113.2-201ENST00000604370 208 ntBASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 MIR1199-201ENST00000621445 119 ntBASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms