Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCHNA4D1U4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCHNA4D1U4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCHNA4D1U4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
LCHNA4D1U4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.52■□□□□ 0.55
LCHNA4D1U4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.52■□□□□ 0.55
LCHNA4D1U4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.52■□□□□ 0.55
LCHNA4D1U4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LCHNA4D1U4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 AC140658.5-201ENST00000438532 169 ntBASIC18.51■□□□□ 0.55
LCHNA4D1U4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 KLF2P3-201ENST00000451977 1087 ntBASIC18.51■□□□□ 0.55
LCHNA4D1U4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 FAM86C2P-203ENST00000528684 1004 ntBASIC18.51■□□□□ 0.55
LCHNA4D1U4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.51■□□□□ 0.55
LCHNA4D1U4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 FO538757.1-201ENST00000623083 1397 ntBASIC18.51■□□□□ 0.55
LCHNA4D1U4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCHNA4D1U4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.51■□□□□ 0.55
LCHNA4D1U4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCHNA4D1U4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCHNA4D1U4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCHNA4D1U4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCHNA4D1U4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 AC087163.2-201ENST00000457299 853 ntBASIC18.5■□□□□ 0.55
LCHNA4D1U4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCHNA4D1U4 AL512356.2-201ENST00000546955 174 ntBASIC18.5■□□□□ 0.55
LCHNA4D1U4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCHNA4D1U4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 AC093677.2-201ENST00000600169 1863 ntBASIC18.5■□□□□ 0.55
LCHNA4D1U4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LCHNA4D1U4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 MYCLP1-201ENST00000372451 1075 ntBASIC18.49■□□□□ 0.55
LCHNA4D1U4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.49■□□□□ 0.55
LCHNA4D1U4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 AP001059.3-201ENST00000619053 235 ntBASIC18.49■□□□□ 0.55
LCHNA4D1U4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LCHNA4D1U4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms