Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 API5-211ENST00000534695 560 ntTSL 5 BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGEF1Q9Y6D6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 AC027307.2-201ENST00000591252 911 ntBASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 WIZP1-201ENST00000531444 2299 ntBASIC20.96■□□□□ 0.95
ARFGEF1Q9Y6D6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 AC109635.5-201ENST00000533593 962 ntBASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ARFGEF1Q9Y6D6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 TP53TG3HP-202ENST00000569755 579 ntBASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 AC005412.3-201ENST00000580309 715 ntBASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGEF1Q9Y6D6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 AC007967.4-201ENST00000614700 386 ntBASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF1Q9Y6D6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AL031055.1-201ENST00000606362 631 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms