Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 FAM197Y3-203ENST00000618346 717 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 BX842568.4-201ENST00000421222 227 ntBASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 SIGLEC30P-201ENST00000455569 941 ntBASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 IGHV3-52-201ENST00000519770 353 ntBASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 AL356488.2-201ENST00000602755 427 ntBASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 AL589182.2-201ENST00000619332 1049 ntBASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TSSC4Q9Y5U2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 AC068418.2-201ENST00000577309 3703 ntBASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 AC135776.1-201ENST00000319817 2481 ntBASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 AL049757.1-201ENST00000616842 1596 ntBASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TSSC4Q9Y5U2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 AP002414.3-201ENST00000589352 1468 ntBASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TSSC4Q9Y5U2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms