Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 KRT18P67-201ENST00000432816 1264 ntBASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 RPS2P1-201ENST00000434010 821 ntBASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 HNRNPDP1-201ENST00000439535 754 ntBASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 AF186996.4-201ENST00000467186 377 ntBASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 AC026396.1-201ENST00000419388 421 ntBASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 AC018712.1-201ENST00000455767 687 ntBASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 SLC25A6P4-201ENST00000586535 553 ntBASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGC4Q9Y5F7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGC4Q9Y5F7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGC4Q9Y5F7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms