Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 AC009336.1-201ENST00000608941 1553 ntBASIC17.47■□□□□ 0.39
PKP3Q9Y446 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 AC016396.2-201ENST00000562575 1417 ntBASIC17.47■□□□□ 0.39
PKP3Q9Y446 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.46■□□□□ 0.39
PKP3Q9Y446 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.46■□□□□ 0.39
PKP3Q9Y446 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.46■□□□□ 0.39
PKP3Q9Y446 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.46■□□□□ 0.39
PKP3Q9Y446 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PKP3Q9Y446 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP3Q9Y446 AP005117.1-201ENST00000584346 1413 ntBASIC17.46■□□□□ 0.39
PKP3Q9Y446 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PKP3Q9Y446 CROCCP2-202ENST00000412962 2773 ntBASIC17.45■□□□□ 0.38
PKP3Q9Y446 PP12613-201ENST00000424958 2230 ntBASIC17.45■□□□□ 0.38
PKP3Q9Y446 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 AC141586.5-201ENST00000624546 2050 ntBASIC17.45■□□□□ 0.38
PKP3Q9Y446 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 RBM17P3-201ENST00000417687 1192 ntBASIC17.45■□□□□ 0.38
PKP3Q9Y446 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 AP001269.4-201ENST00000609611 512 ntBASIC17.45■□□□□ 0.38
PKP3Q9Y446 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.45■□□□□ 0.38
PKP3Q9Y446 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 AL023806.1-201ENST00000603994 1649 ntBASIC17.45■□□□□ 0.38
PKP3Q9Y446 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP3Q9Y446 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 AL020989.1-201ENST00000422979 469 ntBASIC17.44■□□□□ 0.38
PKP3Q9Y446 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 AC106795.1-205ENST00000512851 1056 ntBASIC17.44■□□□□ 0.38
PKP3Q9Y446 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.44■□□□□ 0.38
PKP3Q9Y446 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP3Q9Y446 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms