Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 ABCD1P5-201ENST00000445663 754 ntBASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 SLC25A6P4-201ENST00000586535 553 ntBASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 MTDHP3-201ENST00000594186 672 ntBASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 AC008608.2-201ENST00000606089 416 ntBASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.98■□□□□ 0.15
RPH3AQ9Y2J0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 OR6D1P-203ENST00000641209 4860 ntBASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 AC109462.3-201ENST00000573934 613 ntBASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPH3AQ9Y2J0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 AC103564.2-201ENST00000432853 1299 ntBASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPH3AQ9Y2J0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RPH3AQ9Y2J0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RPH3AQ9Y2J0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RPH3AQ9Y2J0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.96■□□□□ 0.14
RPH3AQ9Y2J0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.96■□□□□ 0.14
RPH3AQ9Y2J0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.96■□□□□ 0.14
RPH3AQ9Y2J0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms