Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.46■□□□□ 0.38
MBD1Q9UIS9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.46■□□□□ 0.38
MBD1Q9UIS9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 DDX43P3-201ENST00000441064 443 ntBASIC17.45■□□□□ 0.38
MBD1Q9UIS9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 PDPK2P-202ENST00000562415 1191 ntBASIC17.45■□□□□ 0.38
MBD1Q9UIS9 OR7E47P-204ENST00000575924 449 ntBASIC17.45■□□□□ 0.38
MBD1Q9UIS9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.45■□□□□ 0.38
MBD1Q9UIS9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD1Q9UIS9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 KRT19P2-202ENST00000557173 1012 ntBASIC17.44■□□□□ 0.38
MBD1Q9UIS9 AC096734.2-201ENST00000562054 433 ntBASIC17.44■□□□□ 0.38
MBD1Q9UIS9 STK25P1-201ENST00000585406 838 ntBASIC17.44■□□□□ 0.38
MBD1Q9UIS9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 AC027612.4-201ENST00000605371 583 ntBASIC17.44■□□□□ 0.38
MBD1Q9UIS9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 BCAR1-209ENST00000546196 1340 ntBASIC17.44■□□□□ 0.38
MBD1Q9UIS9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MBD1Q9UIS9 LINC00304-203ENST00000565008 1864 ntBASIC17.44■□□□□ 0.38
MBD1Q9UIS9 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 STK19B-204ENST00000512515 211 ntBASIC17.43■□□□□ 0.38
MBD1Q9UIS9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 AC116407.2-201ENST00000613639 860 ntBASIC17.43■□□□□ 0.38
MBD1Q9UIS9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD1Q9UIS9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AC097637.2-201ENST00000624096 1997 ntBASIC17.42■□□□□ 0.38
MBD1Q9UIS9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms