Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 AL022326.1-202ENST00000641533 845 ntBASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 AL645608.8-201ENST00000606034 2086 ntBASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 SIGLEC16-201ENST00000599858 1437 ntBASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIP2Q9UDT6 HLA-J-201ENST00000462773 1622 ntBASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 PRYP5-201ENST00000451909 266 ntBASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 RPL13AP23-201ENST00000480739 586 ntBASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 AC107918.4-202ENST00000641623 219 ntBASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIP2Q9UDT6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 AL020989.1-201ENST00000422979 469 ntBASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 AC092910.1-201ENST00000482027 1129 ntBASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 AL671883.3-201ENST00000603274 991 ntBASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 AC080080.1-201ENST00000625121 2420 ntBASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms