Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL20A1Q9P218 AC068880.1-201ENST00000507289 2297 ntBASIC19.54■□□□□ 0.72
COL20A1Q9P218 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL20A1Q9P218 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 NOC2LP2-201ENST00000407594 1944 ntBASIC19.53■□□□□ 0.72
COL20A1Q9P218 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 AC107918.2-201ENST00000530817 355 ntBASIC19.53■□□□□ 0.72
COL20A1Q9P218 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 MIR4469-201ENST00000583919 79 ntBASIC19.53■□□□□ 0.72
COL20A1Q9P218 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 C20orf181-201ENST00000623918 480 ntBASIC19.53■□□□□ 0.72
COL20A1Q9P218 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 AC020763.4-201ENST00000623414 4170 ntBASIC19.53■□□□□ 0.72
COL20A1Q9P218 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL20A1Q9P218 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.53■□□□□ 0.72
COL20A1Q9P218 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 HTR5BP-201ENST00000430851 1154 ntBASIC19.52■□□□□ 0.72
COL20A1Q9P218 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 DNAJB3-202ENST00000449667 1266 ntBASIC19.52■□□□□ 0.72
COL20A1Q9P218 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.52■□□□□ 0.72
COL20A1Q9P218 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL20A1Q9P218 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL20A1Q9P218 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
COL20A1Q9P218 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.52■□□□□ 0.71
COL20A1Q9P218 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL20A1Q9P218 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL20A1Q9P218 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.52■□□□□ 0.71
COL20A1Q9P218 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL20A1Q9P218 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL20A1Q9P218 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL20A1Q9P218 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 AC211486.1-202ENST00000416371 468 ntBASIC19.51■□□□□ 0.71
COL20A1Q9P218 AC211476.1-201ENST00000503899 468 ntBASIC19.51■□□□□ 0.71
COL20A1Q9P218 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 AC023141.13-201ENST00000604991 943 ntBASIC19.51■□□□□ 0.71
COL20A1Q9P218 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL20A1Q9P218 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.51■□□□□ 0.71
COL20A1Q9P218 AC092919.2-201ENST00000623631 1645 ntBASIC19.51■□□□□ 0.71
COL20A1Q9P218 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.5■□□□□ 0.71
COL20A1Q9P218 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL20A1Q9P218 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms