Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 AC008687.5-201ENST00000593746 558 ntBASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 AC012313.10-201ENST00000623509 926 ntBASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 AL023973.1-201ENST00000624619 620 ntBASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 AC006449.5-201ENST00000610658 2098 ntBASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CCM2LQ9NUG4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCM2LQ9NUG4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 LINC02012-201ENST00000608206 1725 ntBASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 TSPY17P-201ENST00000450329 467 ntBASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 VENTXP5-201ENST00000523979 775 ntBASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AL441883.1-201ENST00000566170 1045 ntBASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AC010240.3-201ENST00000607688 395 ntBASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCM2LQ9NUG4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms