Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 SNHG9-202ENST00000564014 471 ntBASIC16.91■□□□□ 0.3
THSD1Q9NS62 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.91■□□□□ 0.3
THSD1Q9NS62 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THSD1Q9NS62 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AC079776.2-201ENST00000641154 1609 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 METTL21AP1-201ENST00000438852 635 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 BX005266.1-201ENST00000473402 457 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 AC108751.1-201ENST00000490852 363 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AC005829.1-201ENST00000570002 483 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AL596442.2-201ENST00000610240 980 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 HTR7P1-202ENST00000624664 4411 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AC097374.2-201ENST00000618617 1306 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.9■□□□□ 0.3
THSD1Q9NS62 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THSD1Q9NS62 AC139713.2-201ENST00000641328 2723 ntBASIC16.9■□□□□ 0.3
THSD1Q9NS62 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
THSD1Q9NS62 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.89■□□□□ 0.3
THSD1Q9NS62 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
THSD1Q9NS62 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.89■□□□□ 0.3
THSD1Q9NS62 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.89■□□□□ 0.3
THSD1Q9NS62 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
THSD1Q9NS62 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
THSD1Q9NS62 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms