Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TLR9Q9NR96 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TLR9Q9NR96 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TLR9Q9NR96 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TLR9Q9NR96 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TLR9Q9NR96 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.33■□□□□ 0.53
TLR9Q9NR96 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
TLR9Q9NR96 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TLR9Q9NR96 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.33■□□□□ 0.53
TLR9Q9NR96 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TLR9Q9NR96 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 AL627223.1-201ENST00000416693 442 ntBASIC18.33■□□□□ 0.52
TLR9Q9NR96 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TLR9Q9NR96 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 AC009093.7-201ENST00000623853 1223 ntBASIC18.33■□□□□ 0.52
TLR9Q9NR96 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TLR9Q9NR96 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TLR9Q9NR96 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TLR9Q9NR96 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.33■□□□□ 0.52
TLR9Q9NR96 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC129492.6-201ENST00000611383 1305 ntBASIC18.32■□□□□ 0.52
TLR9Q9NR96 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.32■□□□□ 0.52
TLR9Q9NR96 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC067863.1-201ENST00000494933 530 ntBASIC18.32■□□□□ 0.52
TLR9Q9NR96 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC015911.4-201ENST00000588022 1070 ntBASIC18.32■□□□□ 0.52
TLR9Q9NR96 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC026120.1-201ENST00000611536 926 ntBASIC18.32■□□□□ 0.52
TLR9Q9NR96 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 REXO1L9P-201ENST00000604264 2108 ntBASIC18.32■□□□□ 0.52
TLR9Q9NR96 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms