Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AP001094.4-201ENST00000579008 2176 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
NECTIN3Q9NQS3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NECTIN3Q9NQS3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 RCN1P2-201ENST00000398357 915 ntBASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 AC096633.1-201ENST00000422446 749 ntBASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 KRT126P-201ENST00000549467 1181 ntBASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 AL121772.3-201ENST00000610840 674 ntBASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 AC097374.2-201ENST00000618617 1306 ntBASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NECTIN3Q9NQS3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 AC010460.3-201ENST00000511359 1579 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 AC011270.2-201ENST00000624293 2550 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 AC009949.1-201ENST00000623048 1830 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 AC007967.3-201ENST00000434308 558 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 KRT18P31-201ENST00000506277 1292 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 UNC93B7-201ENST00000509439 705 ntBASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms