Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.39■□□□□ 0.53
CYLDQ9NQC7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 AL031284.1-201ENST00000419297 478 ntBASIC18.39■□□□□ 0.53
CYLDQ9NQC7 PRYP5-201ENST00000451909 266 ntBASIC18.39■□□□□ 0.53
CYLDQ9NQC7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 AP001005.1-201ENST00000571755 1248 ntBASIC18.39■□□□□ 0.53
CYLDQ9NQC7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 NKAPP1-205ENST00000585790 367 ntBASIC18.39■□□□□ 0.53
CYLDQ9NQC7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYLDQ9NQC7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 AC124067.4-201ENST00000519691 2379 ntBASIC18.38■□□□□ 0.53
CYLDQ9NQC7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYLDQ9NQC7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 HNRNPDP1-201ENST00000439535 754 ntBASIC18.37■□□□□ 0.53
CYLDQ9NQC7 SIGLEC30P-201ENST00000455569 941 ntBASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYLDQ9NQC7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.36■□□□□ 0.53
CYLDQ9NQC7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CYLDQ9NQC7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CYLDQ9NQC7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CYLDQ9NQC7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CYLDQ9NQC7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms