Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 GCSHP5-201ENST00000443090 522 ntBASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 AC098590.1-201ENST00000468126 897 ntBASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 DUTP2-201ENST00000519164 463 ntBASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 AC008687.5-201ENST00000593746 558 ntBASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 AC116562.4-202ENST00000641738 218 ntBASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
C12orf4Q9NQ89 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AL023806.1-201ENST00000603994 1649 ntBASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 PP12613-201ENST00000424958 2230 ntBASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 AC010240.3-201ENST00000607688 395 ntBASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C12orf4Q9NQ89 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms