Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC253536.4-201ENST00000440539 267 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 ELK1P1-201ENST00000485699 580 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 RNA5SP412-201ENST00000516234 123 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 MIR4706-201ENST00000582134 82 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 MIR4515-201ENST00000584082 81 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC027307.2-201ENST00000591252 911 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC015967.2-201ENST00000624092 234 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC006435.4-201ENST00000625037 234 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AL356737.1-201ENST00000634391 234 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC104457.1-201ENST00000401024 814 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 CALR4P-201ENST00000431943 946 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 HNRNPUP1-201ENST00000554987 333 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AC004790.1-201ENST00000612686 536 ntBASIC15.94■□□□□ 0.14
CHD8Q9HCK8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHD8Q9HCK8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 USP32P1-208ENST00000506594 1164 ntBASIC15.93■□□□□ 0.14
CHD8Q9HCK8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC087499.5-201ENST00000452760 1342 ntBASIC15.93■□□□□ 0.14
CHD8Q9HCK8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC120498.9-201ENST00000339021 3867 ntBASIC15.93■□□□□ 0.14
CHD8Q9HCK8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 CROCCP4-201ENST00000457096 498 ntBASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC135586.1-201ENST00000539323 574 ntBASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHD8Q9HCK8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 GPAA1P2-201ENST00000417923 928 ntBASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AC009949.1-201ENST00000623048 1830 ntBASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AC018665.1-201ENST00000622927 1362 ntBASIC15.92■□□□□ 0.14
CHD8Q9HCK8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms