Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MIR3180-1-201ENST00000580374 94 ntBASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MIR3180-3-201ENST00000584616 94 ntBASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 BNIP3P18-201ENST00000593976 575 ntBASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 NPAP1P7-201ENST00000613027 823 ntBASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 AC093525.9-201ENST00000624961 1746 ntBASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 OR6D1P-203ENST00000641209 4860 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 AC003669.1-201ENST00000334569 611 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 AC074051.2-201ENST00000565115 352 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 AL445228.2-201ENST00000605589 952 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 AD001527.2-201ENST00000622994 785 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 INTS4P1-201ENST00000438455 1935 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 AC009336.1-201ENST00000608941 1553 ntBASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC40Q9H9A6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 ARMC10P1-201ENST00000313754 855 ntBASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 SLC25A1P3-201ENST00000395415 828 ntBASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 AC104819.1-201ENST00000504587 486 ntBASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 STK19B-204ENST00000512515 211 ntBASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 AP000867.3-201ENST00000524675 377 ntBASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 AC114341.1-201ENST00000618070 349 ntBASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC40Q9H9A6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.42
LRRC40Q9H9A6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRC40Q9H9A6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.64■□□□□ 0.42
LRRC40Q9H9A6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
LRRC40Q9H9A6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms