Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 AP000842.3-202ENST00000569238 1080 ntBASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 AC008267.7-201ENST00000624570 1194 ntBASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 AL353732.1-201ENST00000569618 1459 ntBASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 GNAS-203ENST00000306120 1878 ntBASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 LINC00304-203ENST00000565008 1864 ntBASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 GK-202ENST00000378941 458 ntTSL 3 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 MIR3909-201ENST00000579518 119 ntBASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CNTNAP4Q9C0A0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 AP000974.1-201ENST00000623909 2387 ntBASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.64■■□□□ 1.06
CNTNAP4Q9C0A0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 MIR346-201ENST00000362234 95 ntBASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 HCG4-201ENST00000418983 998 ntBASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 AP005018.1-201ENST00000525475 301 ntBASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP4Q9C0A0 AC138028.4-201ENST00000564984 1845 ntBASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 AL138781.2-201ENST00000617896 1843 ntBASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 RNU1-129P-201ENST00000384064 167 ntBASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 U1.21-201ENST00000580816 167 ntBASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms