Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 TSPY12P-201ENST00000421279 868 ntBASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 AC105020.1-201ENST00000435356 2205 ntBASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 AL391807.1-203ENST00000604392 2365 ntBASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXP3Q9BZS1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
FOXP3Q9BZS1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 HLA-F-220ENST00000434407 884 ntBASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 RN7SL510P-201ENST00000581311 263 ntBASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXP3Q9BZS1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 KRT8P26-201ENST00000534154 1276 ntBASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms