Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 FAM87A-204ENST00000613235 858 ntBASIC16.96■□□□□ 0.31
EBF4Q9BQW3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EBF4Q9BQW3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
EBF4Q9BQW3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EBF4Q9BQW3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EBF4Q9BQW3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
EBF4Q9BQW3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.96■□□□□ 0.3
EBF4Q9BQW3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 TSPY12P-201ENST00000421279 868 ntBASIC16.95■□□□□ 0.3
EBF4Q9BQW3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 AC128688.1-201ENST00000487626 519 ntBASIC16.95■□□□□ 0.3
EBF4Q9BQW3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 AC079602.3-201ENST00000623931 403 ntBASIC16.95■□□□□ 0.3
EBF4Q9BQW3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 KRT8P9-201ENST00000558927 1449 ntBASIC16.95■□□□□ 0.3
EBF4Q9BQW3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF4Q9BQW3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 AC002558.1-201ENST00000488906 803 ntBASIC16.94■□□□□ 0.3
EBF4Q9BQW3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 MIR4785-201ENST00000585005 73 ntBASIC16.94■□□□□ 0.3
EBF4Q9BQW3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EBF4Q9BQW3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms