Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 AC103564.2-201ENST00000432853 1299 ntBASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 AC111152.3-201ENST00000569699 673 ntBASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 PCDHB17P-201ENST00000539533 2393 ntBASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BPIFA3Q9BQP9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 AL513523.2-202ENST00000427283 2040 ntBASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 AL353801.3-201ENST00000609898 542 ntBASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BPIFA3Q9BQP9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 KRT8P10-201ENST00000450021 1447 ntBASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 AL135999.2-201ENST00000622438 1686 ntBASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 HLA-A-202ENST00000376806 1854 ntBASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BPIFA3Q9BQP9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BPIFA3Q9BQP9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms