Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
MTRQ99707 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
MTRQ99707 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MTRQ99707 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MTRQ99707 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MTRQ99707 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
MTRQ99707 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.57■□□□□ 0.72
MTRQ99707 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.57■□□□□ 0.72
MTRQ99707 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.57■□□□□ 0.72
MTRQ99707 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.57■□□□□ 0.72
MTRQ99707 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.57■□□□□ 0.72
MTRQ99707 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 PRORSD1P-202ENST00000563365 2154 ntBASIC19.57■□□□□ 0.72
MTRQ99707 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.57■□□□□ 0.72
MTRQ99707 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MTRQ99707 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTRQ99707 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
MTRQ99707 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.56■□□□□ 0.72
MTRQ99707 FDX1P1-201ENST00000449115 551 ntBASIC19.56■□□□□ 0.72
MTRQ99707 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.56■□□□□ 0.72
MTRQ99707 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MTRQ99707 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
MTRQ99707 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.56■□□□□ 0.72
MTRQ99707 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.56■□□□□ 0.72
MTRQ99707 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.56■□□□□ 0.72
MTRQ99707 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MTRQ99707 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MTRQ99707 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 AL353593.2-201ENST00000602529 1483 ntBASIC19.55■□□□□ 0.72
MTRQ99707 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.55■□□□□ 0.72
MTRQ99707 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.55■□□□□ 0.72
MTRQ99707 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.55■□□□□ 0.72
MTRQ99707 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MTRQ99707 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.55■□□□□ 0.72
MTRQ99707 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.55■□□□□ 0.72
MTRQ99707 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 AD000864.1-201ENST00000624076 2295 ntBASIC19.55■□□□□ 0.72
MTRQ99707 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MTRQ99707 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 AC046185.3-201ENST00000623228 1824 ntBASIC19.55■□□□□ 0.72
MTRQ99707 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MTRQ99707 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
MTRQ99707 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
MTRQ99707 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
MTRQ99707 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MTRQ99707 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 PMPCAP1-201ENST00000508114 1576 ntBASIC19.54■□□□□ 0.72
MTRQ99707 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
MTRQ99707 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.54■□□□□ 0.72
MTRQ99707 FAM197Y8-203ENST00000450145 560 ntBASIC19.54■□□□□ 0.72
MTRQ99707 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
MTRQ99707 SCARNA2-201ENST00000458748 420 ntBASIC19.54■□□□□ 0.72
MTRQ99707 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.54■□□□□ 0.72
MTRQ99707 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.54■□□□□ 0.72
MTRQ99707 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MTRQ99707 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms