Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 FZD10-202ENST00000539839 3282 ntBASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AC125807.1-201ENST00000483097 614 ntBASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AC140878.1-201ENST00000565277 250 ntBASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 AL161645.1-201ENST00000622716 1255 ntBASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 NEFHP1-201ENST00000412845 2629 ntBASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NECTIN4Q96NY8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.89■□□□□ 0.46
NECTIN4Q96NY8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 AC243562.1-201ENST00000560672 389 ntBASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 AL135744.1-201ENST00000565098 629 ntBASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NECTIN4Q96NY8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 SPDYE7P-202ENST00000420373 878 ntBASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 GAPDHP21-201ENST00000450301 1010 ntBASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NECTIN4Q96NY8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN4Q96NY8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
NECTIN4Q96NY8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NECTIN4Q96NY8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms