Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMTM3Q96MX0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CMTM3Q96MX0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMTM3Q96MX0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ESRRAP1-201ENST00000400596 1257 ntBASIC14.97□□□□□ -0.01
CMTM3Q96MX0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 AC112698.1-201ENST00000510299 916 ntBASIC14.97□□□□□ -0.01
CMTM3Q96MX0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.97□□□□□ -0.01
CMTM3Q96MX0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 AC096633.1-201ENST00000422446 749 ntBASIC14.96□□□□□ -0.01
CMTM3Q96MX0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 C1QBPP2-201ENST00000528754 825 ntBASIC14.96□□□□□ -0.01
CMTM3Q96MX0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 AC073648.6-201ENST00000641589 218 ntBASIC14.96□□□□□ -0.01
CMTM3Q96MX0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.96□□□□□ -0.01
CMTM3Q96MX0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CMTM3Q96MX0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CMTM3Q96MX0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms