Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 BX276092.7-203ENST00000637198 1536 ntBASIC17.96■□□□□ 0.47
IFT43Q96FT9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 AC106795.1-205ENST00000512851 1056 ntBASIC17.95■□□□□ 0.46
IFT43Q96FT9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 AL162727.3-201ENST00000635661 2787 ntBASIC17.95■□□□□ 0.46
IFT43Q96FT9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IFT43Q96FT9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.95■□□□□ 0.46
IFT43Q96FT9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 AC096633.1-201ENST00000422446 749 ntBASIC17.94■□□□□ 0.46
IFT43Q96FT9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 AL662844.1-201ENST00000546340 181 ntBASIC17.94■□□□□ 0.46
IFT43Q96FT9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 AL121912.1-201ENST00000603683 238 ntBASIC17.94■□□□□ 0.46
IFT43Q96FT9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 AL355312.1-201ENST00000407115 2176 ntBASIC17.94■□□□□ 0.46
IFT43Q96FT9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.94■□□□□ 0.46
IFT43Q96FT9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IFT43Q96FT9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 AC097374.2-201ENST00000618617 1306 ntBASIC17.93■□□□□ 0.46
IFT43Q96FT9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
IFT43Q96FT9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IFT43Q96FT9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms