Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
DDX11Q96FC9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX11Q96FC9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX11Q96FC9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DDX11Q96FC9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
DDX11Q96FC9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX11Q96FC9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX11Q96FC9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX11Q96FC9 AL138688.1-201ENST00000624851 1594 ntBASIC20.64■□□□□ 0.9
DDX11Q96FC9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.9
DDX11Q96FC9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.64■□□□□ 0.9
DDX11Q96FC9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX11Q96FC9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX11Q96FC9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.64■□□□□ 0.89
DDX11Q96FC9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX11Q96FC9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 MTDHP3-201ENST00000594186 672 ntBASIC20.64■□□□□ 0.89
DDX11Q96FC9 GPALPP1-207ENST00000611650 899 ntBASIC20.64■□□□□ 0.89
DDX11Q96FC9 AL355877.3-201ENST00000622820 899 ntBASIC20.64■□□□□ 0.89
DDX11Q96FC9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX11Q96FC9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX11Q96FC9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX11Q96FC9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX11Q96FC9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX11Q96FC9 AL023806.1-201ENST00000603994 1649 ntBASIC20.64■□□□□ 0.89
DDX11Q96FC9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 AC073648.2-201ENST00000510116 352 ntBASIC20.63■□□□□ 0.89
DDX11Q96FC9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 AL138831.2-201ENST00000606564 490 ntBASIC20.63■□□□□ 0.89
DDX11Q96FC9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 LINC01451-201ENST00000623792 534 ntBASIC20.63■□□□□ 0.89
DDX11Q96FC9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX11Q96FC9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DDX11Q96FC9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 RBM17P3-201ENST00000417687 1192 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms