Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 AC046185.3-201ENST00000623228 1824 ntBASIC17.91■□□□□ 0.46
HDAC11Q96DB2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC11Q96DB2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 AC132938.5-201ENST00000624980 1813 ntBASIC17.9■□□□□ 0.46
HDAC11Q96DB2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HDAC11Q96DB2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HDAC11Q96DB2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HDAC11Q96DB2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HDAC11Q96DB2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.46
HDAC11Q96DB2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
HDAC11Q96DB2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 AC116353.5-201ENST00000638148 1699 ntBASIC17.89■□□□□ 0.45
HDAC11Q96DB2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC11Q96DB2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 PMPCAP1-201ENST00000508114 1576 ntBASIC17.88■□□□□ 0.45
HDAC11Q96DB2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 AC003669.1-201ENST00000334569 611 ntBASIC17.88■□□□□ 0.45
HDAC11Q96DB2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 NUS1P2-201ENST00000417358 873 ntBASIC17.88■□□□□ 0.45
HDAC11Q96DB2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 HCG4P8-203ENST00000443049 980 ntBASIC17.88■□□□□ 0.45
HDAC11Q96DB2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC11Q96DB2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms