Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.67■□□□□ 0.1
PHF3Q92576 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 CRYGEP-201ENST00000412192 528 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 DDX43P3-201ENST00000441064 443 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.67■□□□□ 0.1
PHF3Q92576 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 AC141586.5-201ENST00000624546 2050 ntBASIC15.66■□□□□ 0.1
PHF3Q92576 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF3Q92576 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PHF3Q92576 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHF3Q92576 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHF3Q92576 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PHF3Q92576 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHF3Q92576 AC023274.1-201ENST00000418278 595 ntBASIC15.66■□□□□ 0.1
PHF3Q92576 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 AC108073.2-201ENST00000464002 357 ntBASIC15.66■□□□□ 0.1
PHF3Q92576 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.66■□□□□ 0.1
PHF3Q92576 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF3Q92576 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHF3Q92576 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF3Q92576 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 LTB4R2-202ENST00000528054 3092 ntBASIC15.66■□□□□ 0.1
PHF3Q92576 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.66■□□□□ 0.1
PHF3Q92576 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF3Q92576 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 AL138688.1-201ENST00000624851 1594 ntBASIC15.65■□□□□ 0.1
PHF3Q92576 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 AC009947.1-201ENST00000444350 727 ntBASIC15.65■□□□□ 0.1
PHF3Q92576 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.65■□□□□ 0.1
PHF3Q92576 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 AL022326.1-202ENST00000641533 845 ntBASIC15.65■□□□□ 0.1
PHF3Q92576 AP000867.4-201ENST00000641616 219 ntBASIC15.65■□□□□ 0.1
PHF3Q92576 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHF3Q92576 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PHF3Q92576 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.65■□□□□ 0.1
PHF3Q92576 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.65■□□□□ 0.1
PHF3Q92576 DNAJB3-201ENST00000446806 729 ntBASIC15.65■□□□□ 0.1
PHF3Q92576 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.65■□□□□ 0.1
PHF3Q92576 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF3Q92576 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHF3Q92576 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PHF3Q92576 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PHF3Q92576 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.64■□□□□ 0.09
PHF3Q92576 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHF3Q92576 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms