Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 DDX43P3-201ENST00000441064 443 ntBASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 AL157888.1-201ENST00000631930 593 ntBASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40AQ8WXH6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 AC092597.1-201ENST00000487352 616 ntBASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 AC010240.3-201ENST00000607688 395 ntBASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 AC060834.1-201ENST00000443027 2032 ntBASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40AQ8WXH6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 AL603756.1-201ENST00000606511 2163 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms