Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 AC092171.3-201ENST00000610122 2651 ntBASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 BX664615.1-201ENST00000443558 458 ntBASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 AL359075.1-203ENST00000462729 1002 ntBASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 LINC01023-201ENST00000606054 436 ntBASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 EGFEM1P-202ENST00000431685 1563 ntBASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 KRT18P38-201ENST00000449496 1282 ntBASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 VENTXP5-201ENST00000523979 775 ntBASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 RNF126P1-202ENST00000569893 925 ntBASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC44A1Q8WWI5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 Z83836.1-201ENST00000624605 1642 ntBASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms