Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF138Q8WVD3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF138Q8WVD3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF138Q8WVD3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 AC106730.1-201ENST00000566722 1090 ntBASIC15.62■□□□□ 0.09
RNF138Q8WVD3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.62■□□□□ 0.09
RNF138Q8WVD3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 PI4KAP1-204ENST00000612579 1703 ntBASIC15.62■□□□□ 0.09
RNF138Q8WVD3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF138Q8WVD3 AC002310.6-201ENST00000624451 1377 ntBASIC15.62■□□□□ 0.09
RNF138Q8WVD3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 RPL13AP23-201ENST00000480739 586 ntBASIC15.61■□□□□ 0.09
RNF138Q8WVD3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 AC120114.3-201ENST00000611923 658 ntBASIC15.61■□□□□ 0.09
RNF138Q8WVD3 AC010654.1-201ENST00000615722 808 ntBASIC15.61■□□□□ 0.09
RNF138Q8WVD3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF138Q8WVD3 AP001094.4-201ENST00000579008 2176 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 AC092053.1-201ENST00000605787 1936 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 MRPL20P1-201ENST00000400819 433 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 AC107918.2-201ENST00000530817 355 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 AC004790.2-201ENST00000623588 572 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RNF138Q8WVD3 AC104109.2-201ENST00000602919 1418 ntBASIC15.6■□□□□ 0.09
RNF138Q8WVD3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF138Q8WVD3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF138Q8WVD3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms