Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC018712.1-201ENST00000455767 687 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 AC073648.2-201ENST00000510116 352 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 MIR5100-201ENST00000579544 119 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 AL355877.3-201ENST00000622820 899 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 AL356309.3-201ENST00000624132 1934 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 PMS2P2-201ENST00000425039 1128 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 AL355385.1-201ENST00000606123 409 ntBASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.68■□□□□ 0.42
SHROOM3Q8TF72 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 FGFR3P6-201ENST00000457012 610 ntBASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 AC139887.3-201ENST00000568585 713 ntBASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 AL121772.3-201ENST00000610840 674 ntBASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.67■□□□□ 0.42
SHROOM3Q8TF72 AC022211.2-201ENST00000585075 2527 ntBASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 AL020989.1-201ENST00000422979 469 ntBASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 BX005266.1-201ENST00000473402 457 ntBASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 TERC-201ENST00000602385 541 ntBASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 AC097637.2-201ENST00000624096 1997 ntBASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 PCDHA12-202ENST00000613593 2588 ntBASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.66■□□□□ 0.42
SHROOM3Q8TF72 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms