Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AC092068.3-201ENST00000587894 2016 ntBASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 PCDH8P1-201ENST00000428983 2773 ntBASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AP003733.1-201ENST00000491725 852 ntBASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AL441883.1-201ENST00000566170 1045 ntBASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 RN7SL850P-201ENST00000579959 291 ntBASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPS4Y2Q8TD47 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 AC046158.3-201ENST00000624947 2558 ntBASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 KRT18P57-201ENST00000443599 1254 ntBASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4Y2Q8TD47 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPS4Y2Q8TD47 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms